Lumbricus rubellus

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LumbriBASE Library Details

This page gives summary details of EST numbers and cDNA libraries for the species present in LumbriBASE: Lumbricus rubellus, Eisenia andrei, Nepenthes virens and Haementeria depressa. The summaries were last updated on 30 March 2006, and so are out of date (July 2010)

Lumbricus terrestris in LumbriBASE

Library Description Total ESTs No. of single ESTs ESTs in clusters No. of gene objects Redun- dancy
Library specific gene objects
number percentage
1 Earthworm Adult Control Library 1173 290 883 650 1.805 325 50
2 Earthworm Cadmium Exposure Library 2230 849 1381 1480 1.507 948 64
3 Earthworm Late Cocoon Library 2728 547 2181 1186 2.300 810 68
4 Earthworm Fluoranthene Exposure Library 2336 824 1512 1519 1.538 903 59
5 Earthworm Atrazine Exposure Library 1739 752 987 1320 1.317 807 61
6 Earthworm Control Head Enriched Library 2569 665 1904 1300 1.976 827 63
7 Juvenile Earthworm Library 2859 836 2023 1625 1.759 977 60
8 Earthworm Reproductive Subtraction Library 73 53 20 66 1.106 57 86
9 Earthworm Copper Exposure Library 1518 555 963 1038 1.462 627 60
All All ESTs/Clusters in LumbriBASE 17225 5371 11854 7629 2.258 - -

 

Eisenia andrei in EandreiBASE

Library Description Total ESTs No. of single ESTs ESTs in clusters No. of gene objects Redun- dancy
Library specific gene objects
number percentage
1 Eisenia andrei midgut cDNA library 1108 576 532 690 1.606 690 100
All All ESTs/Clusters in EandreiBASE 1108 576 532 690 1.606 - -

Redundancy = number of ESTs / number of gene objects

Nepenthes (Nereis) virens in NereisBASE

Library
 Description Total ESTs No. of single ESTs ESTs in clusters No. of gene objects Redun- dancy
Library specific gene objects
number percentage
1
 NA 615 254 361 357 1.723 258 72
2
 NB 591 82 509 216 2.736 85 39
3
 NC 578 152 426 279 2.072 155 55
4
 ND 621 80 541 199 3.121 85 42
5
 NE 614 99 515 237 2.591 101 42
6
 NF 466 99 367 181 2.575 100 55
7
 NG 613 252 361 419 1.463 259 61
8
 NH 618 226 392 382 1.618 232 60
9
 NJ 632 229 403 392 1.612 234 59
10
 NK 640 207 433 357 1.793 215 60
11
 NL 449 45 404 101 4.446 50 49
12
 NM 541 196 345 357 1.515 205 57
All
 All ESTs/Clusters in NereisBASE 6978 1921 5057 2379 2.933 - -

Redundancy = number of ESTs / number of gene objects

Haementeria depressa in HaementeriaBASE

Library Description Total ESTs No. of single ESTs ESTs in clusters No. of gene objects Redun- dancy
Library specific gene objects
number percentage
1 891 362 529 479 1.860 479 100
All All ESTs/Clusters in HaementeriaBASE 891 362 529 479 1.860 - -

Redundancy = number of ESTs / number of gene objects

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