earthworms.org

Home of the Lumbricus rubellus genome project
@ The Blaxter Lab, Institute of Evolutionary Biology, School of Biological Sciences, The University of Edinburgh

The people behind the genome project

Edinburgh University

GenePool

Cardiff University

CEH

The Lumbricus rubellus genome project is coordinated from Edinburgh by Ben Elsworth, a BBSRC-funded PhD student and Mark Blaxter. Both are in the Institute of Evolutionary Biology of the University of Edinburgh.

The project is embedded within Mark Blaxter's research group, and relies upon the skills and expertise of wet lab technologists and skilled bioinformaticians (and their tools) within the GenePool. GenePool is managed by Dr Karim Gharbi, and is part of NERC's Biomolecular Analysis Facility (NBAF).

The earthworm expertise for the project comes from a team of collaborators based across the UK and abroad.

Peter Kille and John Morgan are earthworm ecologists and excotoxicologists based at the University of Cardiff, where they have been using molecular tools to unravel earthworm diversity and specifically L. rubellus' responses to heavy metals in the soils. Pete and John braved the mines of North Wales to track down, capture and genotype the single specimens that underpin the genome project

David Spurgeon and Claus Svendsen are earthworm ecologists based in the Centre for Ecology and Hydrology in Wallingford. Claus and Dave can breed earthworms, and have long experience of exposure and treatment of cultured l. rubellus.

Stephen Sturzenbaum is based in London

Jake Bundy is a metabolomics expert based at Imperial College, London

 

 

EcoWorm - see also the EcoWorm project pages

The EcoWorm Consortium was assembled to use L. rubellus alongside the model nematode Caenorhabditis elegans in a wide ranging program of investigations into the responses of 'soil organisms' to heavy metal and organic pollutants.

EcoWorm was coordinated from Cardiff by Peter Kille and John Morgan, and included Mark Blaxyter and team in Edinburgh, Dave Spurgeon and Claus Svendsen in CEH, and Stephen Sturzenbaum (then also in Cardiff).

EcoWorm included collaborators in proteomics at the University of Aberystwyth, in metabolomics at Imperial College London (Jake Bundy), in ecotoxicology at AstraZeneca, and statistics at Wageningen University, Netherlands.

EcoWorm was funded by the NERC Environmental Genomics thematic research program from 2002-2006.

 

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